Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurivirga caldicuralii DSM 17737 (GCF_900141795.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Sulfurivirga caldicuralii DSM 17737, or try another query

BUQ81_RS02435 SAMN05443662_0490 WP_074200793.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

BWI76_RS11670: Succinylornithine transaminase (EC 2.6.1.81) from Klebsiella michiganensis

46% id,
92% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

44% id,
92% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

43% id,
93% cov

More...

bioA BUQ81_RS01125 SAMN05443662_0226 WP_074200562.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

31% id,
95% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

32% id,
92% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

32% id,
90% cov

More...

hemL BUQ81_RS04050 SAMN05443662_0815 WP_074201116.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

30% id,
88% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

33% id,
80% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

33% id,
80% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory