Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurivirga caldicuralii DSM 17737 (GCF_900141795.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sulfurivirga caldicuralii DSM 17737, or try another query

dapE BUQ81_RS03950 SAMN05443662_0795 WP_074201097.1: succinyl-diaminopimelate desuccinylase
is similar to:
PaperBLAST

ARGE_DICDI / P54638: Acetylornithine deacetylase; N-acetylornithinase; AO; Acetylornithinase; NAO; EC 3.5.1.16 from Dictyostelium discoideum

25% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory