Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurivirga caldicuralii DSM 17737 (GCF_900141795.1)

Found 14 curated entries in PaperBLAST's database that match '4.2.3.4' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Sulfurivirga caldicuralii DSM 17737, or try another query

aroB BUQ81_RS00170 SAMN05443662_0033 WP_074200387.1: 3-dehydroquinate synthase
is similar to:
PaperBLAST

AROB_ECOLI / P07639: 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli
AroB / b3389: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli
aroB / P07639: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli
P07639: 3-dehydroquinate synthase (EC 4.2.3.4) from Escherichia coli

58% id,
99% cov

DHQS_SOLLC / Q8RU74: 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Solanum lycopersicum

62% id,
82% cov

DHQS_ACTCC / U3KRF2: 3-dehydroquinate synthase, chloroplastic; EC 4.2.3.4 from Actinidia chinensis

61% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory