Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)
Found 55 curated entries in PaperBLAST's database that match '1.1.1.35' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Malonomonas rubra DSM 5091, or try another query
| fabG BUB13_RS03185 SAMN02745165_00643 WP_072905517.1: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to: | PaperBLAST |
HCD2_HUMAN / Q99714: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Homo sapiens | 36% id, 97% cov |
HCD2_MOUSE / O08756: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-estradiol 17-dehydrogenase; 2-methyl-3-hydroxybutyryl-CoA dehydrogenase; MHBD; 3-alpha-(17-beta)-hydroxysteroid dehydrogenase (NAD(+)); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase type II; 3alpha(or 20beta)-hydroxysteroid dehydrogenase; 7-alpha-hydroxysteroid dehydrogenase; Endoplasmic reticulum-associated amyloid beta-peptide-binding protein; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Short chain dehydrogenase/reductase family 5C member 1; Short-chain type dehydrogenase/reductase XH98G2; Type II HADH; EC 1.1.1.35; EC 1.1.1.62; EC 1.1.1.239; EC 1.1.1.178; EC 1.1.1.53; EC 1.1.1.159 from Mus musculus | 35% id, 97% cov |
HCD2_DROME / O18404: 3-hydroxyacyl-CoA dehydrogenase type-2; 17-beta-hydroxysteroid dehydrogenase 10; 17-beta-HSD 10; 3-hydroxyacyl-CoA dehydrogenase type II; Hydroxysteroid dehydrogenase; Mitochondrial ribonuclease P protein 2; Mitochondrial RNase P protein 2; Scully protein; Type II HADH; EC 1.1.1.35; EC 1.1.1.51; EC 1.1.1.62; EC 1.1.1.-; EC 1.1.1.53 from Drosophila melanogaster | 33% id, 99% cov |
| BUB13_RS11320 SAMN02745165_02293 WP_072908864.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
Q84X95: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Brassica napus | 30% id, 61% cov |
Q84X96: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Brassica napus | 28% id, 61% cov |
| BUB13_RS00930 SAMN02745165_00189 WP_072904870.1: enoyl-CoA hydratase-related protein is similar to: | PaperBLAST |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula | 40% id, 39% cov |
D3RXI4: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) from Ferroglobus placidus | 37% id, 39% cov |
fadB / Q9HZJ2: fatty acid oxidation complex α subunit (EC 1.1.1.35; EC 4.2.1.74) from Pseudomonas aeruginosa | 33% id, 34% cov |
| lpdA BUB13_RS04645 SAMN02745165_00935 WP_072906044.1: dihydrolipoyl dehydrogenase is similar to: | PaperBLAST |
HCDH_HUMAN / Q16836: Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Homo sapiens | 23% id, 59% cov |
HCDH_PIG / P00348: Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; L-3-hydroxyacyl CoA dehydrogenase; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Sus scrofa | 31% id, 22% cov |
HCDH_MOUSE / Q61425: Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial; HCDH; Medium and short-chain L-3-hydroxyacyl-coenzyme A dehydrogenase; Short-chain 3-hydroxyacyl-CoA dehydrogenase; EC 1.1.1.35 from Mus musculus | 37% id, 18% cov |
| BUB13_RS05985 SAMN02745165_01206 WP_072906772.1: enoyl-CoA hydratase-related protein is similar to: | PaperBLAST |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula | 30% id, 39% cov |
FADJ_ECOLI / P77399: Fatty acid oxidation complex subunit alpha; EC 4.2.1.17; EC 5.1.2.3; EC 1.1.1.35 from Escherichia coli | 33% id, 28% cov |
fadB / Q9HZJ2: fatty acid oxidation complex α subunit (EC 1.1.1.35; EC 4.2.1.74) from Pseudomonas aeruginosa | 28% id, 28% cov |
| BUB13_RS10730 SAMN02745165_02175 WP_072908752.1: D-2-hydroxyacid dehydrogenase is similar to: | PaperBLAST |
paaH2 / Q0KCM8: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Cupriavidus necator | 31% id, 17% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 205117-205992 (frame +1) on NZ_FQZT01000001.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence is similar to: | PaperBLAST |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula | 40% id, 40% cov |
BPHYT_RS13545: 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) from Burkholderia phytofirmans | 35% id, 28% cov |
Q0KEG0: 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35); enoyl-CoA hydratase (EC 4.2.1.17) from Cupriavidus necator | 25% id, 21% cov |
| 193605-194468 (frame -3) on NZ_FQZT01000003.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence is similar to: | PaperBLAST |
Msed_0399 / A4YDS4: crotonyl-CoA hydratase/(S)-3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.35; EC 4.2.1.150) from Metallosphaera sedula | 29% id, 40% cov |
Lawrence Berkeley National Laboratory