Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Malonomonas rubra DSM 5091, or try another query

ilvC BUB13_RS01265 SAMN02745165_00256 WP_279625946.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

ILVC_PSEAE / Q9HVA2: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Pseudomonas aeruginosa

84% id,
100% cov

ILVC_AZOVD / C1DFH7: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Azotobacter vinelandii
C1DFH7: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Azotobacter vinelandii

83% id,
100% cov

ilvC / Q0KCU2: acetohydroxyacid isomeroreductase (EC 1.1.1.86) from Cupriavidus necator

70% id,
100% cov

More...

BUB13_RS03800 SAMN02745165_00767 WP_072905751.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q59818: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces avermitilis

29% id,
25% cov

ILVC_MYCTU / P9WKJ7: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 from Mycobacterium tuberculosis
A5U713: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis
P9WKJ7: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Mycobacterium tuberculosis

31% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory