Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 21 curated entries in PaperBLAST's database that match '1.3.8.5' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Malonomonas rubra DSM 5091, or try another query

BUB13_RS14880 SAMN02745165_03012 WP_072909626.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Psest_2445: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri

25% id,
92% cov

PS417_13850: 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas simiae

25% id,
91% cov

Psest_2440: isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri

26% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory