Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 33 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Malonomonas rubra DSM 5091, or try another query

proC BUB13_RS11555 SAMN02745165_02341 WP_072908920.1: pyrroline-5-carboxylate reductase
is similar to:
PaperBLAST

P5CR_METAC / Q9HH99: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Methanosarcina acetivorans

47% id,
100% cov

G7KRM5: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Medicago truncatula

47% id,
96% cov

PROC1 / F2E7Q2: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Hordeum vulgare

46% id,
95% cov

More...

BUB13_RS15515 SAMN02745165_03141 WP_072909685.1: Rossmann-like and DUF2520 domain-containing protein
is similar to:
PaperBLAST

CA265_RS18505: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Pedobacter sp.

24% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory