Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.5' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Malonomonas rubra DSM 5091, or try another query

BUB13_RS14705 SAMN02745165_02977 WP_072909529.1: amino acid aminotransferase
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

58% id,
100% cov

TyrB / b4054: tyrosine aminotransferase (EC 2.6.1.57; EC 2.6.1.6; EC 2.6.1.42; EC 2.6.1.1; EC 2.6.1.5; EC 2.6.1.27) from Escherichia coli

44% id,
100% cov

TYRB_KLEPN / O85746: Tyrosine aminotransferase; TyrAT; Aromatic-amino-acid transaminase; Aspartate aminotransferase; EC 2.6.1.5; EC 2.6.1.57; EC 2.6.1.1 from Klebsiella pneumoniae

44% id,
100% cov

hemL BUB13_RS08945 SAMN02745165_01813 WP_072908061.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
92% cov

BUB13_RS10290 SAMN02745165_02086 WP_072908594.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_TRYCR / P33447: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Trypanosoma cruzi

26% id,
99% cov

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

24% id,
88% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

25% id,
84% cov

More...

BUB13_RS00880 SAMN02745165_00179 WP_072904861.1: aminotransferase
is similar to:
PaperBLAST

ISS1_ARATH / Q9C969: Aromatic aminotransferase ISS1; Methionine aminotransferase ISS1; Phenylalanine aminotransferase ISS1; Protein INDOLE SEVERE SENSITIVE 1; Protein REVERSAL OF SAV3 PHENOTYPE 1; Tryptophan aminotransferase ISS1; Tyrosine aminotransferase ISS1; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.88 from Arabidopsis thaliana

28% id,
93% cov

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
44% cov

A0A5B8TZA8: tyrosine transaminase (EC 2.6.1.5) from Leishmania donovani

25% id,
39% cov

BUB13_RS14460 SAMN02745165_02928 WP_072909485.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

27% id,
77% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

27% id,
77% cov

A0A0A7DPK0: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

28% id,
74% cov

More...

BUB13_RS10560 SAMN02745165_02139 WP_072908723.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ATTY_HUMAN / P17735: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens

25% id,
84% cov

A0A2K9VNZ8: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

25% id,
78% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

28% id,
62% cov

More...

BUB13_RS15120 SAMN02745165_03059 WP_072909607.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

28% id,
74% cov

BUB13_RS02385 SAMN02745165_00483 WP_072905149.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

24% id,
78% cov

ATTY_HUMAN / P17735: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Homo sapiens

23% id,
78% cov

ATTY_MOUSE / Q8QZR1: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Mus musculus
Q8QZR1: tyrosine transaminase (EC 2.6.1.5) from Mus musculus

23% id,
78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

79356-80849 (frame -2) on NZ_FQZT01000012.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence
is similar to:
PaperBLAST

A0A2K9VP07: tyrosine transaminase (EC 2.6.1.5) from Malus domestica
Also see hits to annotated proteins above

26% id,
88% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis
Also see hits to annotated proteins above

27% id,
78% cov

54108-55418 (frame +3) on NZ_FQZT01000014.1 Malonomonas rubra DSM 5091, whole genome shotgun sequence
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus
Also see hits to annotated proteins above

27% id,
82% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory