Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)
Found 3 curated entries in PaperBLAST's database that match '3-isopropylmalate dehydratase%LeuC' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Malonomonas rubra DSM 5091, or try another query
| leuC BUB13_RS11705 SAMN02745165_02371 WP_072908947.1: 3-isopropylmalate dehydratase large subunit is similar to: | PaperBLAST |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 66% id, 100% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 33% id, 68% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 42% id, 33% cov |
| BUB13_RS02530 SAMN02745165_00512 WP_072905201.1: 3-isopropylmalate dehydratase large subunit is similar to: | PaperBLAST |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 45% id, 100% cov |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 35% id, 65% cov |
| BUB13_RS01160 SAMN02745165_00235 WP_072904915.1: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase is similar to: | PaperBLAST |
LeuC / b0072: 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli | 27% id, 78% cov |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 34% id, 40% cov |
| acnA BUB13_RS12355 SAMN02745165_02506 WP_072909077.1: aconitate hydratase AcnA is similar to: | PaperBLAST |
DVU2982: 3-isopropylmalate dehydratase / (R)-citramalate isomerase, large subunit LeuC (EC 4.2.1.33; EC 4.2.1.35) from Desulfovibrio vulgaris | 29% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory