Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 13 curated entries in PaperBLAST's database that match '3.5.1.94' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Malonomonas rubra DSM 5091, or try another query

BUB13_RS06250 SAMN02745165_01261 WP_072906871.1: gamma-glutamyl-gamma-aminobutyrate hydrolase family protein
is similar to:
PaperBLAST

AO353_29305: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

34% id,
96% cov

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

35% id,
94% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

34% id,
94% cov

More...

BUB13_RS04265 SAMN02745165_00859 WP_072905947.1: CTP synthase
is similar to:
PaperBLAST

BWI76_RS10705: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Klebsiella michiganensis

28% id,
72% cov

guaA BUB13_RS01560 SAMN02745165_00315 WP_072904989.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

32% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory