Curated BLAST for Genomes

 

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 8 curated entries in PaperBLAST's database that match '3.5.1.96' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Malonomonas rubra DSM 5091, or try another query

BUB13_RS07625 SAMN02745165_01538 WP_072907499.1: succinylglutamate desuccinylase/aspartoacylase family protein
is similar to:
PaperBLAST

O50177: succinylglutamate desuccinylase (EC 3.5.1.96) from Pseudomonas aeruginosa

26% id,
63% cov

BUB13_RS13565 SAMN02745165_02744 WP_072909315.1: succinylglutamate desuccinylase/aspartoacylase family protein
is similar to:
PaperBLAST

PfGW456L13_1977: Succinylglutamate desuccinylase (EC 3.5.1.96) from Pseudomonas fluorescens

26% id,
60% cov

O50177: succinylglutamate desuccinylase (EC 3.5.1.96) from Pseudomonas aeruginosa

26% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory