Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Malonomonas rubra DSM 5091 (GCF_900142125.1)

Found 50 curated entries in PaperBLAST's database that match '5.4.2.2' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Malonomonas rubra DSM 5091, or try another query

BUB13_RS13075 SAMN02745165_02649 WP_072909216.1: phosphomannomutase is similar to:	PaperBLAST
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	61% id, 100% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	35% id, 98% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	36% id, 95% cov
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	33% id, 97% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	26% id, 98% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	27% id, 64% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	27% id, 47% cov
More...

glmM BUB13_RS05520 SAMN02745165_01114 WP_072906534.1: phosphoglucosamine mutase is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	35% id, 97% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	30% id, 99% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	28% id, 96% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	26% id, 99% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	28% id, 69% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	24% id, 72% cov
C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	26% id, 60% cov
PGM2_MOUSE / Q7TSV4: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-1; Phosphoglucomutase-2; PGM 2; EC 5.4.2.7; EC 5.4.2.2 from Mus musculus	23% id, 58% cov
M1T754: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Sphingomonas sanxanigenens	28% id, 40% cov
PGM2_HUMAN / Q96G03: Phosphopentomutase; Glucose phosphomutase 2; Phosphodeoxyribomutase; Phosphoglucomutase-2; EC 5.4.2.7; EC 5.4.2.2 from Homo sapiens PGM2 / Q96G03: phosphoglucomutase-2 (EC 5.4.2.2; EC 5.4.2.7) from Homo sapiens	29% id, 21% cov
More...

BUB13_RS00970 SAMN02745165_00197 WP_072904878.1: phosphoglucomutase/phosphomannomutase family protein is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	31% id, 97% cov
pgmA / I6Y2G3: phosphoglucomutase (EC 5.4.2.2) from Mycobacterium tuberculosis I6Y2G3: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Mycobacterium tuberculosis	31% id, 92% cov
PGM_ECOLI / P36938: Phosphoglucomutase; PGM; Glucose phosphomutase; EC 5.4.2.2 from Escherichia coli Blu / b0688: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli pgm / GB\|ABB65241.1: phosphoglucomutase; EC 5.4.2.2 from Escherichia coli pgm / P36938: phosphoglucomutase (EC 5.4.2.2) from Escherichia coli	30% id, 92% cov
A0A0H3NJ17: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica Q8ZQW9: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Salmonella enterica	29% id, 92% cov
PGCA_BACSU / P18159: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Bacillus subtilis pgcA / P18159: α-phosphoglucomutase (EC 5.4.2.2) from Bacillus subtilis	31% id, 87% cov
PGM1_PARTE / P47244: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; Parafusin; Pf; pp63; EC 5.4.2.2 from Paramecium tetraurelia	28% id, 93% cov
PGM1_HUMAN / P36871: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Homo sapiens PGM1 / P36871: phosphoglucomutase-1 (EC 5.4.2.2) from Homo sapiens P36871: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Homo sapiens	29% id, 89% cov
Q980S1: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2); phosphomannomutase (EC 5.4.2.8) from Saccharolobus solfataricus	26% id, 98% cov
PGM_ENTH1 / O15820: Phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Entamoeba histolytica	27% id, 89% cov
Q8PGN7: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Xanthomonas citri	25% id, 95% cov
ALGC_PSEAE / P26276: Phosphomannomutase/phosphoglucomutase; PMM / PGM; EC 5.4.2.2; EC 5.4.2.8 from Pseudomonas aeruginosa algC / P26276: phosphomannomutase (EC 5.4.2.2; EC 5.4.2.8) from Pseudomonas aeruginosa	26% id, 92% cov
PGCA_STAA8 / Q2FVC1: Phosphoglucomutase; PGM; Alpha-phosphoglucomutase; Glucose phosphomutase; EC 5.4.2.2 from Staphylococcus aureus	27% id, 89% cov
C6L2F4: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	26% id, 89% cov
PGM1_RABIT / P00949: Phosphoglucomutase-1; PGM 1; Glucose phosphomutase 1; EC 5.4.2.2 from Oryctolagus cuniculus	29% id, 76% cov
PGM2_YEAST / P37012: Phosphoglucomutase 2; PGM 2; D-glucose-1,6-diphosphate:D-glucose-1-phosphate phosphotransferase; Glucose phosphomutase 2; EC 5.4.2.2 from Saccharomyces cerevisiae PGM2 / P37012: phosphoglucomutase-2 (EC 5.4.2.2) from Saccharomyces cerevisiae	28% id, 75% cov
C6L2E2: phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) from Toxoplasma gondii	28% id, 65% cov
More...

BUB13_RS11620 SAMN02745165_02354 WP_072908932.1: mannose-1-phosphate guanyltransferase is similar to:	PaperBLAST
PGMMM_THEKO / Q68BJ6: Phosphoglucomutase/phosphomannomutase; PGM/PMM; EC 5.4.2.2; EC 5.4.2.8 from Thermococcus kodakarensis	29% id, 99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory