Searching in Duganella sacchari Sac-22 (GCF_900143065.1)
Found 23 curated entries in PaperBLAST's database that match '4.3.1.18' as complete word(s).
These curated entries have 19 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Duganella sacchari Sac-22, or try another query
BUA36_RS25770 SAMN05192549_11530 WP_072788965.1: threo-3-hydroxy-L-aspartate ammonia-lyase is similar to: | PaperBLAST |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Schizosaccharomyces pombe | 70% id, 100% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 42% id, 100% cov |
SRR_ORYSJ / Q7XSN8: Serine racemase; D-serine dehydratase; D-serine ammonia-lyase; L-serine dehydratase; L-serine ammonia-lyase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Oryza sativa | 42% id, 93% cov |
ilvA BUA36_RS18985 SAMN05192549_108102 WP_072786890.1: threonine ammonia-lyase, biosynthetic is similar to: | PaperBLAST |
SRR_SCHPO / O59791: Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Schizosaccharomyces pombe | 34% id, 93% cov |
SRR_ARATH / Q2PGG3: Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Arabidopsis thaliana | 34% id, 92% cov |
Q54HH2: D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum | 32% id, 96% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
3782-5011 (frame -3) on NZ_FRCX01000001.1 Duganella sacchari strain Sac-22, whole genome shotgun sequence is similar to: | PaperBLAST |
DSD1_CHICK / A0A8V1ABE9: D-serine dehydratase; D-serine deaminase; EC 4.3.1.18 from Gallus gallus | 34% id, 81% cov |
3729-3956 (frame -2) on NZ_FRCX01000001.1 Duganella sacchari strain Sac-22, whole genome shotgun sequence is similar to: | PaperBLAST |
DSD1_CHICK / A0A8V1ABE9: D-serine dehydratase; D-serine deaminase; EC 4.3.1.18 from Gallus gallus | 40% id, 23% cov |
DSD1_YEAST / P53095: D-serine dehydratase; D-serine deaminase; DSD; EC 4.3.1.18 from Saccharomyces cerevisiae | 36% id, 15% cov |
DSD1_DICDI / Q54XE5: D-serine dehydratase; D-serine deaminase; EC 4.3.1.18 from Dictyostelium discoideum | 38% id, 12% cov |
Lawrence Berkeley National Laboratory