Curated BLAST for Genomes

 

Curated BLAST

Searching in Williamsia sterculiae CPCC 203464 (GCF_900156495.1)

Found 52 curated entries in PaperBLAST's database that match '1.5.5.2' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Williamsia sterculiae CPCC 203464, or try another query

BW971_RS03110 SAMN05445060_0632 WP_076476549.1: proline dehydrogenase family protein
is similar to:
PaperBLAST

PRODH_THET2 / Q72IB8: Proline dehydrogenase; PRODH; Proline oxidase; TtPRODH; EC 1.5.5.2 from Thermus thermophilus
Q72IB8: proline dehydrogenase (EC 1.5.5.2) from Thermus thermophilus

36% id,
99% cov

PRODH_DEIRA / Q9RW55: Proline dehydrogenase; PRODH; DrPRODH; Proline oxidase; EC 1.5.5.2 from Deinococcus radiodurans

35% id,
99% cov

PROD2_BACSU / P94390: Proline dehydrogenase 2; PRODH 2; Proline oxidase 2; EC 1.5.5.2 from Bacillus subtilis

37% id,
94% cov

More...

solA BW971_RS05780 SAMN05445060_1170 WP_076477555.1: N-methyl-L-tryptophan oxidase
is similar to:
PaperBLAST

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

27% id,
97% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

27% id,
97% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

27% id,
95% cov

More...

BW971_RS04320 SAMN05445060_0876 WP_076476896.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

24% id,
97% cov

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

24% id,
97% cov

BW971_RS04830 SAMN05445060_0978 WP_076477025.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

22% id,
93% cov

BW971_RS04960 SAMN05445060_1004 WP_076477069.1: NAD(P)H-quinone dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
69% cov

BW971_RS00930 SAMN05445060_0188 WP_076475688.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

24% id,
67% cov

pruA BW971_RS03115 SAMN05445060_0633 WP_076476551.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

34% id,
45% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

31% id,
44% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

31% id,
43% cov

More...

glpD BW971_RS04980 SAMN05445060_1008 WP_076477448.1: glycerol-3-phosphate dehydrogenase
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

23% id,
65% cov

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

22% id,
54% cov

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

56% id,
11% cov

More...

BW971_RS14520 SAMN05445060_2949 WP_076481165.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

30% id,
46% cov

AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense

30% id,
37% cov

Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp.

32% id,
35% cov

More...

BW971_RS02050 SAMN05445060_0418 WP_076476004.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

28% id,
47% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

28% id,
46% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

30% id,
43% cov

More...

BW971_RS05790 SAMN05445060_1172 WP_076477559.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

29% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
45% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

30% id,
44% cov

More...

BW971_RS04825 SAMN05445060_0977 WP_076477023.1: gamma-aminobutyraldehyde dehydrogenase
is similar to:
PaperBLAST

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

29% id,
46% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
46% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
46% cov

More...

BW971_RS07620 SAMN05445060_1542 WP_076478051.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
46% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

28% id,
45% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

28% id,
46% cov

More...

BW971_RS03485 SAMN05445060_0707 WP_076476644.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

29% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

28% id,
44% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

27% id,
44% cov

More...

BW971_RS11740 SAMN05445060_2379 WP_076479717.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
41% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

29% id,
42% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
42% cov

More...

BW971_RS18685 SAMN05445060_3786 WP_076482575.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

26% id,
44% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

26% id,
44% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

26% id,
44% cov

More...

BW971_RS10750 SAMN05445060_2178 WP_076479348.1: NADP-dependent succinic semialdehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

28% id,
40% cov

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

25% id,
44% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

25% id,
44% cov

More...

thiO BW971_RS08485 SAMN05445060_1714 WP_076478525.1: glycine oxidase ThiO
is similar to:
PaperBLAST

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

27% id,
41% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

26% id,
42% cov

BW971_RS17535 SAMN05445060_3555 WP_076482293.1: glutamate synthase subunit beta
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
43% cov

BW971_RS01605 SAMN05445060_0327 WP_076475884.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis

25% id,
40% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

25% id,
40% cov

Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp.

27% id,
36% cov

More...

BW971_RS01360 SAMN05445060_0278 WP_076475826.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

HP15_2688: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Marinobacter adhaerens

28% id,
36% cov

BW971_RS18665 SAMN05445060_3782 WP_076482573.1: NAD(P)/FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
40% cov

BW971_RS03050 SAMN05445060_0620 WP_076476534.1: TIGR03364 family FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

28% id,
32% cov

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

31% id,
24% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

32% id,
24% cov

BW971_RS14305 SAMN05445060_2906 WP_083710017.1: NADPH-dependent 2,4-dienoyl-CoA reductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

26% id,
33% cov

BW971_RS02645 SAMN05445060_0540 WP_076476438.1: geranylgeranyl reductase family protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

52% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. Except for 4 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

466647-469163 (frame -2) on NZ_FTNT01000001.1 Williamsia sterculiae strain CPCC 203464, whole genome shotgun sequence
is similar to:
PaperBLAST

AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense
Also see hits to annotated proteins above

31% id,
46% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri
Also see hits to annotated proteins above

29% id,
47% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis
Also see hits to annotated proteins above

29% id,
48% cov

More...

26212-27867 (frame +1) on NZ_FTNT01000009.1 Williamsia sterculiae strain CPCC 203464, whole genome shotgun sequence
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri
Also see hits to annotated proteins above

29% id,
48% cov

262061-263701 (frame -1) on NZ_FTNT01000005.1 Williamsia sterculiae strain CPCC 203464, whole genome shotgun sequence
is similar to:
PaperBLAST

SO3774: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2; EC 1.2.1.88) from Shewanella oneidensis
Also see hits to annotated proteins above

26% id,
48% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.
Also see hits to annotated proteins above

26% id,
48% cov

RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis
Also see hits to annotated proteins above

29% id,
38% cov

120499-122208 (frame -1) on NZ_FTNT01000013.1 Williamsia sterculiae strain CPCC 203464, whole genome shotgun sequence
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri
Also see hits to annotated proteins above

26% id,
46% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory