Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 162 curated entries in PaperBLAST's database that match '1.1.1.1' as complete word(s).

These curated entries have 134 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

tdh B5D49_RS01275 SAMN02745704_00253 WP_234990588.1: L-threonine 3-dehydrogenase
is similar to:		 PaperBLAST

Q8U259: alcohol dehydrogenase (EC 1.1.1.1) from Pyrococcus furiosus

 43% id,
98% cov

Q8L3C9: alcohol dehydrogenase (EC 1.1.1.1) from Flavobacterium frigidimaris

 32% id,
100% cov

B2ZRE3: alcohol dehydrogenase (EC 1.1.1.1) from Thermus sp.

 32% id,
99% cov

More...

betA B5D49_RS13960 SAMN02745704_02796 WP_078718338.1: choline dehydrogenase
is similar to:		 PaperBLAST

Q76HN6: alcohol dehydrogenase (EC 1.1.1.1) from Pseudomonas putida

 41% id,
99% cov

ercA B5D49_RS02515 SAMN02745704_00500 WP_078716085.1: alcohol dehydrogenase-like regulatory protein ErcA
is similar to:		 PaperBLAST

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

 40% id,
96% cov

ADH4_SCHPO / Q09669: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; EC 1.1.1.1 from Schizosaccharomyces pombe
adh4 / RF|NP_592819.1: alcohol dehydrogenase Adh4; EC 1.1.1.1 from Schizosaccharomyces pombe
Q09669: alcohol dehydrogenase (EC 1.1.1.1) from Schizosaccharomyces pombe

 39% id,
91% cov

ADH4_YEAST / P10127: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; ADHIV; EC 1.1.1.1 from Saccharomyces cerevisiae
ADH4 / P10127: alcohol dehydrogenase IV (EC 1.1.1.1) from Saccharomyces cerevisiae

 36% id,
97% cov

More...

B5D49_RS02645 SAMN02745704_00527 WP_078716111.1: iron-containing alcohol dehydrogenase
is similar to:		 PaperBLAST

EUTG_ECOLI / P76553: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Escherichia coli

 41% id,
93% cov

EUTG_SALTY / P41795: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Salmonella typhimurium

 40% id,
93% cov

A4IP64: alcohol dehydrogenase (EC 1.1.1.1); long-chain-alcohol dehydrogenase (EC 1.1.1.192) from Geobacillus thermodenitrificans

 39% id,
97% cov

More...

B5D49_RS10190 SAMN02745704_02040 WP_078717595.1: iron-containing alcohol dehydrogenase
is similar to:		 PaperBLAST

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

 32% id,
100% cov

ADH4_YEAST / P10127: Alcohol dehydrogenase 4; Alcohol dehydrogenase IV; ADHIV; EC 1.1.1.1 from Saccharomyces cerevisiae
ADH4 / P10127: alcohol dehydrogenase IV (EC 1.1.1.1) from Saccharomyces cerevisiae

 32% id,
98% cov

A0A1D3TV27: alcohol dehydrogenase (EC 1.1.1.1) from Anaerobium acetethylicum

 31% id,
99% cov

More...

fabG B5D49_RS01965 SAMN02745704_00388 WP_078715956.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:		 PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 33% id,
96% cov

OXI1_COCH4 / N4WE73: Dehydrogenase OXI1; T-toxin biosynthesis protein OXI1; EC 1.1.1.1 from Cochliobolus heterostrophus

 30% id,
99% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 31% id,
91% cov

B5D49_RS08575 SAMN02745704_01715 WP_078717273.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 30% id,
98% cov

ADH1_EUPLT / A0A165U5V5: Short chain aldehyde dehydrogenase 1; ElADH1; Jolkinol C synthase; EC 1.1.1.1; EC 1.1.1.- from Euphorbia lathyris

 24% id,
88% cov

B5D49_RS00550 SAMN02745704_00111 WP_078715704.1: iron-containing alcohol dehydrogenase
is similar to:		 PaperBLAST

gbsB: alcohol dehydrogenase; EC 1.1.1.1 from Bacillus subtilis

 31% id,
89% cov

EUTG_ECOLI / P76553: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Escherichia coli

 29% id,
94% cov

ADH2_ZYMMO / P0DJA2: Alcohol dehydrogenase 2; Alcohol dehydrogenase II; ADH II; EC 1.1.1.1 from Zymomonas mobilis
adhB / P0DJA2: alcohol dehydrogenase II monomer (EC 1.1.1.1) from Zymomonas mobilis
P0DJA2: alcohol dehydrogenase (EC 1.1.1.1) from Zymomonas mobilis

 30% id,
90% cov

More...

B5D49_RS07610 SAMN02745704_01522 WP_078717088.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:		 PaperBLAST

ASQE_EMENI / Q5AR48: Short chain dehydrogenase asqE; 4'-methoxyviridicatin/aspoquinolone biosynthesis cluster protein asqE; Aspoquinolone biosynthesis protein E; EC 1.1.1.1 from Emericella nidulans

 33% id,
69% cov

Q4J9F2: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 27% id,
75% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 27% id,
27% cov

ispD B5D49_RS02225 SAMN02745704_00439 WP_078716003.1: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
is similar to:		 PaperBLAST

ADH_DROLE / P10807: Alcohol dehydrogenase; EC 1.1.1.1 from Drosophila lebanonensis

 30% id,
67% cov

Q4J702: alcohol dehydrogenase (EC 1.1.1.1) from Sulfolobus acidocaldarius

 27% id,
50% cov

B5D49_RS08080 SAMN02745704_01616 WP_078717184.1: SDR family oxidoreductase
is similar to:		 PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

 29% id,
37% cov

pruA B5D49_RS04205 SAMN02745704_00840 WP_078716392.1: L-glutamate gamma-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

A3DCI2: alcohol dehydrogenase (EC 1.1.1.1); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

 24% id,
34% cov

B5D49_RS12890 SAMN02745704_02584 WP_078718125.1: TIGR01777 family oxidoreductase
is similar to:		 PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

 47% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

121241-122512 (frame +2) on NZ_FUYC01000001.1 Paucidesulfovibrio gracilis DSM 16080, whole genome shotgun sequence
is similar to:		 PaperBLAST

EUTG_ECOLI / P76553: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Escherichia coli
Also see hits to annotated proteins above

 29% id,
98% cov

EUTG_SALTY / P41795: Probable alcohol dehydrogenase EutG; Ethanolamine utilization protein EutG; EC 1.1.1.1 from Salmonella typhimurium
Also see hits to annotated proteins above

 29% id,
93% cov

B0K3U7: alcohol dehydrogenase (EC 1.1.1.1); alcohol dehydrogenase (NADP+) (EC 1.1.1.2) from Thermoanaerobacter sp.
Also see hits to annotated proteins above

 26% id,
98% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory