Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 14 curated entries in PaperBLAST's database that match '1.1.1.71' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

B5D49_RS00550 SAMN02745704_00111 WP_078715704.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum

39% id,
91% cov

O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii

26% id,
98% cov

A0A0H3W5U9: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Acetivibrio thermocellus

28% id,
46% cov

More...

B5D49_RS02645 SAMN02745704_00527 WP_078716111.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii

33% id,
98% cov

U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum

26% id,
99% cov

A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum

35% id,
46% cov

More...

B5D49_RS07610 SAMN02745704_01522 WP_078717088.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

31% id,
91% cov

ercA B5D49_RS02515 SAMN02745704_00500 WP_078716085.1: alcohol dehydrogenase-like regulatory protein ErcA
is similar to:
PaperBLAST

O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii

30% id,
93% cov

U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum

24% id,
92% cov

A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum

34% id,
46% cov

More...

B5D49_RS10190 SAMN02745704_02040 WP_078717595.1: iron-containing alcohol dehydrogenase
is similar to:
PaperBLAST

O58517: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pyrococcus horikoshii

28% id,
99% cov

U6CL97: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Pectobacterium atrosepticum

28% id,
95% cov

A0A0H3W5V0: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermoanaerobacterium saccharolyticum

26% id,
47% cov

More...

tdh B5D49_RS01275 SAMN02745704_00253 WP_234990588.1: L-threonine 3-dehydrogenase
is similar to:
PaperBLAST

Q9HMB6: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Halobacterium sp.

27% id,
99% cov

Q5V676: alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Haloarcula marismortui

28% id,
90% cov

fabG B5D49_RS01965 SAMN02745704_00388 WP_078715956.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

C6A190: alcohol dehydrogenase (NADP+) (EC 1.1.1.2); alcohol dehydrogenase [NAD(P)+] (EC 1.1.1.71) from Thermococcus sibiricus

27% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory