Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 15 curated entries in PaperBLAST's database that match '2.6.1.81' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

B5D49_RS05850 SAMN02745704_01165 WP_078716728.1: aspartate aminotransferase family protein
is similar to:		 PaperBLAST

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

 38% id,
99% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

 38% id,
97% cov

ASTC_ECOLI / P77581: Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81 from Escherichia coli
AstC / b1748: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli
astC / RF|NP_416262.1: succinylornithine transaminase; EC 2.6.1.81 from Escherichia coli
astC / P77581: succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11) from Escherichia coli

 38% id,
97% cov

More...

rocD B5D49_RS12615 SAMN02745704_02532 WP_078718069.1: ornithine--oxo-acid transaminase
is similar to:		 PaperBLAST

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa
O30508: succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas aeruginosa

 37% id,
96% cov

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

 37% id,
93% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

 36% id,
94% cov

More...

gabT B5D49_RS03155 SAMN02745704_00631 WP_078716203.1: 4-aminobutyrate--2-oxoglutarate transaminase
is similar to:		 PaperBLAST

Pf1N1B4_3440: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas fluorescens

 36% id,
94% cov

PS417_21710: Succinylornithine transaminase (EC 2.6.1.81) from Pseudomonas simiae

 34% id,
96% cov

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

 36% id,
91% cov

More...

B5D49_RS14700 SAMN02745704_00636 WP_144019096.1: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

 33% id,
91% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

 30% id,
94% cov

BT3758: N-succinylornithine aminotransferase (EC 2.6.1.81) from Bacteroides thetaiotaomicron

 29% id,
97% cov

More...

hemL B5D49_RS08095 SAMN02745704_01619 WP_078717186.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:		 PaperBLAST

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

 30% id,
93% cov

ASTC_SALTY / Q8ZPV2: Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81 from Salmonella typhimurium

 32% id,
88% cov

A0A140N9B6: succinylornithine transaminase (EC 2.6.1.81) from Escherichia coli

 30% id,
88% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory