Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 36 curated entries in PaperBLAST's database that match '2.6.1.83' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

B5D49_RS06010 SAMN02745704_01197 WP_078716755.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus

 60% id,
99% cov

DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans
A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans

 53% id,
99% cov

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 54% id,
98% cov

More...

B5D49_RS04590 SAMN02745704_00916 WP_078716503.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 41% id,
99% cov

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 41% id,
97% cov

DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans
A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans

 40% id,
98% cov

More...

B5D49_RS10555 SAMN02745704_02112 WP_078717662.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 30% id,
98% cov

O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus

 28% id,
98% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 28% id,
98% cov

More...

B5D49_RS13990 SAMN02745704_02802 WP_078718343.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

 29% id,
99% cov

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 29% id,
98% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 29% id,
98% cov

More...

B5D49_RS07615 SAMN02745704_01523 WP_078717089.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans
A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans

 28% id,
96% cov

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

 28% id,
92% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 27% id,
95% cov

More...

B5D49_RS11920 SAMN02745704_02391 WP_078717936.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

DAPAT_SYNFM / A0LEA5: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans
A0LEA5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans

 28% id,
94% cov

Q3MDN5: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

 28% id,
89% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

 28% id,
87% cov

More...

hisC B5D49_RS02160 SAMN02745704_00426 WP_078715991.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

DAPAT_ARATH / Q93ZN9: LL-diaminopimelate aminotransferase, chloroplastic; AtDAP-AT; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; Protein ABERRANT GROWTH AND DEATH 2; EC 2.6.1.83 from Arabidopsis thaliana
DAP / Q93ZN9: L,L-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana
Q93ZN9: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Arabidopsis thaliana

 27% id,
51% cov

B5D49_RS14390 SAMN02745704_02883 WP_078718425.1: cobyric acid synthase
is similar to:		 PaperBLAST

DAPAT_PARUW / Q6MDE0: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Protochlamydia amoebophila
Q6MDE0: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Candidatus Protochlamydia

 26% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory