Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

B5D49_RS12315 SAMN02745704_02471 WP_078718012.1: amidohydrolase family protein
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

32% id,
30% cov

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

42% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory