Curated BLAST for Genomes

 

Curated BLAST

Searching in Paucidesulfovibrio gracilis DSM 16080 (GCF_900167125.1)

Found 21 curated entries in PaperBLAST's database that match '4.2.3.1' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paucidesulfovibrio gracilis DSM 16080, or try another query

thrC B5D49_RS05185 SAMN02745704_01033 WP_200806769.1: threonine synthase
is similar to:
PaperBLAST

DvMF_1945: threonine synthase (EC 4.2.3.1) from Desulfovibrio vulgaris

71% id,
99% cov

O66740: threonine synthase (EC 4.2.3.1) from Aquifex aeolicus

32% id,
97% cov

P83823: threonine synthase (EC 4.2.3.1) from Thermus thermophilus
Q5SL02: threonine synthase (EC 4.2.3.1) from Thermus thermophilus

31% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory