Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus histidinilytica UM2 (GCF_900167915.1)

Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhizorhabdus histidinilytica UM2, or try another query

B5X82_RS14625 SAMN06295920_106141 WP_079648901.1: adenosine kinase
is similar to:
PaperBLAST

H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila

34% id,
85% cov

RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana

31% id,
35% cov

RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae

33% id,
23% cov

B5X82_RS02090 SAMN06295920_101423 WP_079646369.1: adenosine kinase
is similar to:
PaperBLAST

Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum

29% id,
96% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

29% id,
87% cov

BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron

27% id,
81% cov

More...

B5X82_RS16965 SAMN06295920_107275 WP_079649357.1: sugar kinase
is similar to:
PaperBLAST

AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens

26% id,
89% cov

HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae

26% id,
87% cov

BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans

26% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory