Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus histidinilytica UM2 (GCF_900167915.1)

Found 57 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 47 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhizorhabdus histidinilytica UM2, or try another query

B5X82_RS20870 SAMN06295920_11197 WP_079650106.1: isoaspartyl peptidase/L-asparaginase
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

46% id,
97% cov

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

44% id,
98% cov

ASPGP_PYRCJ / A3MUS8: Plant-type L-asparaginase; L-asparagine amidohydrolase; EC 3.5.1.1 from Pyrobaculum calidifontis

41% id,
98% cov

More...

B5X82_RS13590 SAMN06295920_105334 WP_079648687.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

29% id,
25% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

36% id,
13% cov

W0G253: asparaginase (EC 3.5.1.1) from Rhizomucor miehei

32% id,
12% cov

B5X82_RS14950 SAMN06295920_106207 WP_079648960.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

34% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory