Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus histidinilytica UM2 (GCF_900167915.1)

Found 18 curated entries in PaperBLAST's database that match '3.5.1.38' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhizorhabdus histidinilytica UM2, or try another query

B5X82_RS13450 SAMN06295920_105307 WP_079648661.1: glutaminase
is similar to:
PaperBLAST

GlsB / b1524: glutaminase 2 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsB / P0A6W0: glutaminase 2 (EC 3.5.1.38) from Escherichia coli

51% id,
100% cov

GlsA / b0485: glutaminase 1 (EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
glsA / P77454: glutaminase 1 (EC 3.5.1.38) from Escherichia coli

39% id,
99% cov

Gls2 / P28492: glutaminase subunit (EC 3.5.1.38) from Rattus norvegicus

36% id,
51% cov

More...

B5X82_RS06290 SAMN06295920_102516 WP_079647246.1: XrtA/PEP-CTERM system amidotransferase
is similar to:
PaperBLAST

AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli

27% id,
69% cov

AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli
asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli

37% id,
33% cov

B5X82_RS13590 SAMN06295920_105334 WP_079648687.1: ankyrin repeat domain-containing protein
is similar to:
PaperBLAST

ASPG / Q86U10: 60 kDa lysophospholipase (EC 3.1.1.47; EC 3.5.1.38) from Homo sapiens

38% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory