Searching in Rhizorhabdus histidinilytica UM2 (GCF_900167915.1)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhizorhabdus histidinilytica UM2, or try another query
| B5X82_RS00230 SAMN06295920_10148 WP_079646047.1: type III PLP-dependent enzyme is similar to: | PaperBLAST |
AN3846: ornithine decarboxylase; EC 4.1.1.17 from Emericella nidulans | 30% id, 78% cov |
DCOR_YEAST / P08432: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Saccharomyces cerevisiae | 38% id, 13% cov |
SPE1 / GB|AAC49877.1: ornithine decarboxylase (ODC); EC 4.1.1.17 from Candida albicans | 34% id, 13% cov |
| lysA B5X82_RS13795 SAMN06295920_105375 WP_079648727.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
DCOR_CAEEL / P41931: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Caenorhabditis elegans | 24% id, 85% cov |
DCOR_MOUSE / P00860: Ornithine decarboxylase; ODC; EC 4.1.1.17 from Mus musculus | 25% id, 77% cov |
G4XUJ8: ornithine decarboxylase (EC 4.1.1.17) from Erythroxylum coca | 23% id, 80% cov |
| B5X82_RS06245 SAMN06295920_102507 WP_079647238.1: pyridoxal-dependent decarboxylase, exosortase A system-associated is similar to: | PaperBLAST |
P90517: ornithine decarboxylase (EC 4.1.1.17) from Crithidia fasciculata | 26% id, 29% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 47426-48865 (frame -3) on NZ_FUYM01000001.1 Rhizorhabdus histidinilytica strain UM2, whole genome shotgun sequence is similar to: | PaperBLAST |
AN3846: ornithine decarboxylase; EC 4.1.1.17 from Emericella nidulans | 28% id, 95% cov |
| 540287-541729 (frame +2) on NZ_FUYM01000002.1 Rhizorhabdus histidinilytica strain UM2, whole genome shotgun sequence is similar to: | PaperBLAST |
P90517: ornithine decarboxylase (EC 4.1.1.17) from Crithidia fasciculata | 25% id, 39% cov |
Lawrence Berkeley National Laboratory