Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizorhabdus histidinilytica UM2 (GCF_900167915.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.80' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Rhizorhabdus histidinilytica UM2, or try another query

B5X82_RS03865 SAMN06295920_10225 WP_079646741.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

60% id,
100% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

60% id,
96% cov

cmtF / Q51981: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

58% id,
98% cov

More...

B5X82_RS20950 SAMN06295920_111113 WP_079650121.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

55% id,
95% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

51% id,
97% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

52% id,
95% cov

More...

B5X82_RS21455 SAMN06295920_1129 WP_176152665.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

58% id,
91% cov

cmtF / Q51981: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

57% id,
92% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

57% id,
90% cov

More...

B5X82_RS06650 SAMN06295920_1032 WP_079647889.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

53% id,
96% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

51% id,
98% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

50% id,
100% cov

More...

hpaH B5X82_RS11330 SAMN06295920_104375 WP_079648262.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

40% id,
100% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

38% id,
98% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

39% id,
94% cov

More...

B5X82_RS03870 SAMN06295920_10226 WP_079646743.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

39% id,
94% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

35% id,
94% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

33% id,
95% cov

More...

B5X82_RS21450 SAMN06295920_1128 WP_079650225.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

36% id,
98% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

34% id,
98% cov

AMNF_PSESP / Q9KWS4: 2-oxopent-4-enoate hydratase; 2-keto-4-pentenoate hydratase; EC 4.2.1.80 from Pseudomonas sp.

34% id,
95% cov

More...

B5X82_RS06655 SAMN06295920_1033 WP_079647351.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

41% id,
85% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

35% id,
98% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

36% id,
93% cov

More...

B5X82_RS23015 SAMN06295920_11529 WP_079650691.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

MHPD_ECOLI / P77608: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Escherichia coli
MhpS / b0350: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
mhpD / P77608: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
P77608: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Escherichia coli

28% id,
97% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

27% id,
97% cov

cmtF / Q51981: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

26% id,
93% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory