Curated BLAST for Genomes

 

Curated BLAST

Searching in Brevibacterium jeotgali SJ5-8 (GCF_900169175.1)

Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Brevibacterium jeotgali SJ5-8, or try another query

BJEO58_RS14305 BJEO58_02854 WP_101590136.1: (S)-acetoin forming diacetyl reductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

34% id,
99% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

33% id,
99% cov

BJEO58_RS10640 BJEO58_02121 WP_101589457.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

34% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
96% cov

BJEO58_RS06450 BJEO58_01284 WP_101588658.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

33% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

33% id,
97% cov

BJEO58_RS06825 BJEO58_01359 WP_101588722.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

33% id,
97% cov

fabG BJEO58_RS02420 BJEO58_00480 WP_101587443.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

30% id,
99% cov

BJEO58_RS03550 BJEO58_00705 WP_101587828.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
92% cov

BJEO58_RS13450 BJEO58_02682 WP_308297872.1: 3-oxoacyl-ACP reductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

28% id,
98% cov

fabG BJEO58_RS08150 BJEO58_01623 WP_101588987.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
97% cov

BJEO58_RS04740 BJEO58_00945 WP_101588162.1: SDR family oxidoreductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

29% id,
79% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

28% id,
79% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory