Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum hydrothermale DSM 13146 (GCF_900176285.1)

Found 26 curated entries in PaperBLAST's database that match '1.13.11.27' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfacinum hydrothermale DSM 13146, or try another query

mce B9A12_RS01640 SAMN02746041_00332 WP_084055793.1: methylmalonyl-CoA epimerase
is similar to:
PaperBLAST

Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from uncultured soil

28% id,
29% cov

Psest_3514: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) from Pseudomonas stutzeri

32% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory