Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfacinum hydrothermale DSM 13146 (GCF_900176285.1)

Found 25 curated entries in PaperBLAST's database that match '2.7.2.8' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfacinum hydrothermale DSM 13146, or try another query

argB B9A12_RS04085 SAMN02746041_00826 WP_245802341.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa

58% id,
97% cov

ARGB_THEMA / Q9X2A4: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Thermotoga maritima
Q9X2A4: acetylglutamate kinase (EC 2.7.2.8) from Thermotoga maritima

54% id,
98% cov

Q6V1L5: acetylglutamate kinase (EC 2.7.2.8) from Synechococcus elongatus

50% id,
93% cov

More...

B9A12_RS03940 SAMN02746041_00798 WP_084056507.1: aspartate kinase
is similar to:
PaperBLAST

Q59281: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium glutamicum

26% id,
74% cov

Q6R6P5: acetylglutamate kinase (EC 2.7.2.8) from Corynebacterium crenatum

26% id,
69% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

66219-67157 (frame +3) on NZ_FWXF01000003.1 Desulfacinum hydrothermale DSM 13146, whole genome shotgun sequence
is similar to:
PaperBLAST

ARGB_PSEAE / Q9HTN2: Acetylglutamate kinase; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; NAGK; EC 2.7.2.8 from Pseudomonas aeruginosa
Q9HTN2: acetylglutamate kinase (EC 2.7.2.8) from Pseudomonas aeruginosa
Also see hits to annotated proteins above

58% id,
100% cov

A0A1D6E3W6: acetylglutamate kinase (EC 2.7.2.8) from Zea mays
Also see hits to annotated proteins above

48% id,
84% cov

NAGK_ARATH / Q9SCL7: Acetylglutamate kinase, chloroplastic; N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AtNAGK; EC 2.7.2.8 from Arabidopsis thaliana
Q9SCL7: acetylglutamate kinase (EC 2.7.2.8) from Arabidopsis thaliana
Also see hits to annotated proteins above

45% id,
82% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory