Curated BLAST for Genomes

 

Curated BLAST

Searching in Tistlia consotensis USBA 355 (GCF_900177295.1)

Found 8 curated entries in PaperBLAST's database that match '4.1.1.77' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Tistlia consotensis USBA 355, or try another query

hpaH B9O00_RS08695 SAMN05428998_10567 WP_085122085.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Paenibacillus sp.

38% id,
94% cov

Q1XGK3: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Pseudomonas putida

35% id,
98% cov

B0VXM8: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Geobacillus stearothermophilus

34% id,
94% cov

More...

B9O00_RS21380 SAMN05428998_12132 WP_085124769.1: hydratase
is similar to:
PaperBLAST

Q1XGK3: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Pseudomonas putida

30% id,
96% cov

nbaG / Q83V28: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Pseudomonas fluorescens

31% id,
84% cov

B9O00_RS26015 SAMN05428998_13070 WP_159460335.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

B0VXM8: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Geobacillus stearothermophilus

28% id,
96% cov

praD / C4TP06: 2-oxo-3-hexenedioate decarboxylase (EC 4.1.1.77) from Paenibacillus sp.

27% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory