Curated BLAST for Genomes

 

Curated BLAST

Searching in Tistlia consotensis USBA 355 (GCF_900177295.1)

Found 10 curated entries in PaperBLAST's database that match '4.2.1.80' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Tistlia consotensis USBA 355, or try another query

hpaH B9O00_RS08695 SAMN05428998_10567 WP_085122085.1: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

38% id,
95% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

37% id,
96% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

37% id,
93% cov

More...

B9O00_RS26015 SAMN05428998_13070 WP_159460335.1: fumarylacetoacetate hydrolase family protein
is similar to:
PaperBLAST

MHPD_ECOLI / P77608: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Escherichia coli
MhpS / b0350: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
mhpD / P77608: 2-hydroxypentadienoate hydratase (EC 4.2.1.80) from Escherichia coli
P77608: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Escherichia coli

31% id,
96% cov

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC 4.2.1.80 from Comamonas testosteroni

31% id,
96% cov

cmtF / Q51981: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

32% id,
91% cov

More...

B9O00_RS21380 SAMN05428998_12132 WP_085124769.1: hydratase
is similar to:
PaperBLAST

xylJ / P23107: 2-oxopent-4-enoate hydratase subunit (EC 4.2.1.80) from Pseudomonas putida

28% id,
95% cov

todG / Q79DA5: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Pseudomonas putida

27% id,
97% cov

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC 4.2.1.80) from Comamonas testosteroni

29% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory