Curated BLAST for Genomes

 

Curated BLAST

Searching in Tistlia consotensis USBA 355 (GCF_900177295.1)

Found 1 curated entries in PaperBLAST's database that match '2-deoxy-3-keto-D-ribonoate cleavage enzyme' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Tistlia consotensis USBA 355, or try another query

B9O00_RS08755 SAMN05428998_10579 WP_085122095.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

66% id,
98% cov

B9O00_RS26395 SAMN05428998_13166 WP_085125715.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

64% id,
100% cov

B9O00_RS11810 SAMN05428998_107177 WP_085122869.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

60% id,
98% cov

B9O00_RS24170 SAMN05428998_12650 WP_085125312.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

55% id,
100% cov

B9O00_RS28920 SAMN05428998_1409 WP_085126347.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

34% id,
97% cov

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

38% id,
39% cov

B9O00_RS16290 SAMN05428998_11376 WP_085123753.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

35% id,
51% cov

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

36% id,
40% cov

B9O00_RS01180 SAMN05428998_101237 WP_085120593.1: 3-keto-5-aminohexanoate cleavage protein
is similar to:
PaperBLAST

PS417_07250: 2-deoxy-3-keto-D-ribonoate cleavage enzyme from Pseudomonas simiae

35% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory