Curated BLAST for Genomes

 

Curated BLAST

Searching in Allosphingosinicella indica Dd16 (GCF_900177405.1)

Found 38 curated entries in PaperBLAST's database that match '2.3.1.46' as complete word(s).

These curated entries have 34 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Allosphingosinicella indica Dd16, or try another query

B9N75_RS05680 SAMN06295910_1154 WP_085217919.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

METXS_XANCP / Q8P6V8: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Xanthomonas campestris

42% id,
79% cov

METXS_BREDA / F4QV02: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Brevundimonas diminuta

40% id,
79% cov

SST_STEMA / A0A0I9RJ56: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Stenotrophomonas maltophilia

29% id,
98% cov

More...

B9N75_RS02810 SAMN06295910_0571 WP_085217427.1: alpha/beta fold hydrolase
is similar to:
PaperBLAST

METXS_PSEU2 / Q4ZZ78: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Pseudomonas syringae

26% id,
65% cov

SST_XANCP / Q8P8L2: Serine O-succinyltransferase; SST; Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.-; EC 2.3.1.46 from Xanthomonas campestris

25% id,
62% cov

B9N75_RS00715 SAMN06295910_0147 WP_172840772.1: alpha/beta hydrolase
is similar to:
PaperBLAST

METXS_XANCP / Q8P6V8: Homoserine O-succinyltransferase; HST; Homoserine transsuccinylase; HTS; EC 2.3.1.46 from Xanthomonas campestris

28% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory