Curated BLAST for Genomes

 

Curated BLAST

Searching in Allosphingosinicella indica Dd16 (GCF_900177405.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Allosphingosinicella indica Dd16, or try another query

B9N75_RS11775 SAMN06295910_2390 WP_085218968.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

54% id,
100% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

52% id,
99% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

42% id,
99% cov

carA B9N75_RS10355 SAMN06295910_2104 WP_085218731.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

37% id,
82% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

31% id,
81% cov

guaA B9N75_RS03755 SAMN06295910_0765 WP_085217592.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

26% id,
95% cov

B9N75_RS04535 SAMN06295910_0923 WP_085217719.1: GMP synthase
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

31% id,
32% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

48% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory