Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloechinothrix alba DSM 45207 (GCF_900188115.1)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Haloechinothrix alba DSM 45207, or try another query

ilvC CHB84_RS03215 SAMN06265360_10390 WP_089299961.1: ketol-acid reductoisomerase
is similar to:
PaperBLAST

A0A0K2AZ61: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces ambofaciens

69% id,
98% cov

Q9Z565: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces coelicolor
D6ERQ9: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

69% id,
98% cov

D6EC76: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Streptomyces lividans

69% id,
98% cov

More...

CHB84_RS16120 SAMN06265360_11681 WP_089302443.1: 2-hydroxy-3-oxopropionate reductase
is similar to:
PaperBLAST

D3PT81: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Meiothermus ruber

28% id,
59% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory