Curated BLAST for Genomes

 

Curated BLAST

Searching in Haloechinothrix alba DSM 45207 (GCF_900188115.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Haloechinothrix alba DSM 45207, or try another query

CHB84_RS03205 SAMN06265360_10388 WP_089300102.1: acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

69% id,
98% cov

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

50% id,
98% cov

gcl CHB84_RS16125 SAMN06265360_11682 WP_089302444.1: glyoxylate carboligase
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

37% id,
93% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

34% id,
93% cov

CHB84_RS19910 SAMN06265360_12625 WP_089303187.1: acetolactate synthase
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

26% id,
96% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

27% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory