Curated BLAST
Searching in Sphingopyxis indica DS15 (GCF_900188185.1)
Found 37 curated entries in PaperBLAST's database that match '3.5.99.6' as complete word(s).
These curated entries have 30 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Sphingopyxis indica DS15, or try another query
CHB69_RS04915 SAMN06295955_10293 WP_245836536.1: SIS domain-containing protein is similar to: | PaperBLAST |
Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis | 53% id, 97% cov |
CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus | 52% id, 93% cov |
PfGW456L13_4831: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 46% id, 99% cov |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 44% id, 100% cov |
AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 44% id, 100% cov |
PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens | 43% id, 99% cov |
Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp. | 39% id, 99% cov |
SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis | 39% id, 99% cov |
Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis | 38% id, 99% cov |
More... |
glmS CHB69_RS03285 SAMN06295955_101649 WP_089214500.1: glutamine--fructose-6-phosphate transaminase (isomerizing) is similar to: | PaperBLAST |
Ga0059261_1644: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Sphingomonas koreensis | 34% id, 98% cov |
AO353_04455: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 31% id, 99% cov |
Shewana3_3113: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella sp. | 30% id, 98% cov |
SO3506: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella oneidensis | 30% id, 98% cov |
PfGW456L13_4831: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Pseudomonas fluorescens | 30% id, 97% cov |
PGA1_c27890: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Phaeobacter inhibens | 30% id, 97% cov |
CCNA_00453: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Caulobacter crescentus | 34% id, 81% cov |
Sama_0945: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Shewanella amazonensis | 31% id, 86% cov |
BPHYT_RS02735: Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) from Burkholderia phytofirmans | 31% id, 84% cov |
SM_b21218: glucosamine-6-phosphate deaminase, isomerizing (EC 3.5.99.6) from Sinorhizobium meliloti | 25% id, 94% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory