Searching in Sphingopyxis indica DS15 (GCF_900188185.1)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 17 relevant proteins in Sphingopyxis indica DS15, or try another query
| CHB69_RS13110 SAMN06295955_109137 WP_089216448.1: SDR family oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 36% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 34% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 36% id, 88% cov |
| CHB69_RS13650 SAMN06295955_11073 WP_089216568.1: SDR family oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 33% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 33% id, 95% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 95% cov |
| CHB69_RS04385 SAMN06295955_101875 WP_089214805.1: 3-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 31% id, 94% cov |
| CHB69_RS13645 SAMN06295955_11072 WP_089216567.1: SDR family oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 99% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| CHB69_RS00010 SAMN06295955_1012 WP_082737146.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 95% cov |
| CHB69_RS08780 SAMN06295955_10587 WP_089215633.1: SDR family oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 95% cov |
| CHB69_RS13600 SAMN06295955_11063 WP_089216558.1: SDR family oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 95% cov |
| CHB69_RS13615 SAMN06295955_11066 WP_089216561.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 27% id, 95% cov |
| CHB69_RS08725 SAMN06295955_10574 WP_089215624.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 94% cov |
| CHB69_RS03425 SAMN06295955_101677 WP_089214784.1: SDR family oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| CHB69_RS09235 SAMN06295955_105175 WP_089215714.1: SDR family oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 26% id, 95% cov |
| CHB69_RS06290 SAMN06295955_10357 WP_089215151.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 94% cov |
| CHB69_RS02805 SAMN06295955_101554 WP_089214416.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 26% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 25% id, 93% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 25% id, 94% cov |
| CHB69_RS12715 SAMN06295955_10958 WP_089216386.1: SDR family oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 76% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 71% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 71% cov |
| CHB69_RS17865 SAMN06295955_1194 WP_089217281.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 92% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 25% id, 92% cov |
| CHB69_RS02965 SAMN06295955_101584 WP_089214775.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 84% cov |
| CHB69_RS09050 SAMN06295955_105138 WP_089215744.1: SDR family NAD(P)-dependent oxidoreductase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 26% id, 76% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 852-1643 (frame -3) on NZ_FZPA01000001.1 Sphingopyxis indica strain DS15, whole genome shotgun sequence is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 97% cov |
Lawrence Berkeley National Laboratory