Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfurobacterium atlanticum DSM 15668 (GCF_900188395.1)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfurobacterium atlanticum DSM 15668, or try another query

leuB CHB58_RS06890 SAMN06265340_11019 WP_089323375.1: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

P31958: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum

59% id,
100% cov

LEU3_SALTY / P37412: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Salmonella typhimurium
P37412: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Salmonella enterica

56% id,
98% cov

LEU3_ECOLI / P30125: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli
LeuB / b0073: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli
leuB / P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli
P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli

55% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory