Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfurobacterium atlanticum DSM 15668 (GCF_900188395.1)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfurobacterium atlanticum DSM 15668, or try another query

CHB58_RS04895 SAMN06265340_105103 WP_089322991.1: sulfide-dependent adenosine diphosphate thiazole synthase
is similar to:
PaperBLAST

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

34% id,
14% cov

trmFO CHB58_RS01655 SAMN06265340_10213 WP_089322369.1: FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO
is similar to:
PaperBLAST

KMO_YEAST / P38169: Kynurenine 3-monooxygenase; Biosynthesis of nicotinic acid protein 4; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Saccharomyces cerevisiae
P38169: kynurenine 3-monooxygenase (EC 1.14.13.9) from Saccharomyces cerevisiae

31% id,
13% cov

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

47% id,
8% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

40% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

15919-17244 (frame +1) on NZ_FZOB01000002.1 Desulfurobacterium atlanticum strain DSM 15668, whole genome shotgun sequence
is similar to:
PaperBLAST

KMO_HUMAN / O15229: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Homo sapiens
KMO / O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens
O15229: kynurenine 3-monooxygenase (EC 1.14.13.9) from Homo sapiens

23% id,
54% cov

KMO_MOUSE / Q91WN4: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Mus musculus
Q91WN4: kynurenine 3-monooxygenase (EC 1.14.13.9) from Mus musculus

25% id,
50% cov

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi
Also see hits to annotated proteins above

25% id,
38% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory