Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfurobacterium atlanticum DSM 15668 (GCF_900188395.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.7.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfurobacterium atlanticum DSM 15668, or try another query

CHB58_RS08345 SAMN06265340_11534 WP_089323653.1: DUF4931 domain-containing protein
is similar to:
PaperBLAST

UT / Q19TV7: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Cucumis melo

32% id,
97% cov

Q8ZXN7: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Pyrobaculum aerophilum

27% id,
98% cov

A2AMS3: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Mus musculus

24% id,
92% cov

More...

CHB58_RS08860 SAMN06265340_1198 WP_089323752.1: HIT family protein
is similar to:
PaperBLAST

GAL7_HYPJE / Q96UI1: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC 2.7.7.12 from Hypocrea jecorina

27% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory