Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter ovatus JA234 (GCF_900207575.1)

Found 25 curated entries in PaperBLAST's database that match '2.4.2.2' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Cereibacter ovatus JA234, or try another query

CRO07_RS09610 SAMN05878503_10750 WP_097030480.1: thymidine phosphorylase
is similar to:
PaperBLAST

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli

50% id,
99% cov

A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei

46% id,
95% cov

Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

42% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory