PaperBLAST – Find papers about a protein or its homologs

 

Align A0A3G4V556 to PF04461 (DUF520)

A0A3G4V556 has 160 amino acids

Query:       DUF520  [M=161]
Accession:   PF04461.17
Description: Protein of unknown function (DUF520)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.6e-67  212.8   6.2    1.8e-67  212.7   6.2    1.0  1  A0A3G4V556  


Domain annotation for each sequence (and alignments):
>> A0A3G4V556  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  212.7   6.2   1.8e-67   1.8e-67       1     161 []       2     159 ..       2     159 .. 0.98

  Alignments for each domain:
  == domain 1  score: 212.7 bits;  conditional E-value: 1.8e-67
      DUF520   1 psfDivsevdlqevknAvdqakkeietRfDfkgskaeielkekekeitltaesefklkqvldilksklvkrgvdlkaldvgkvekasgkkvkqevklke 99 
                 psfDivse+d+ e++nAvd+a++e++tRfDf++++a+++ ++  ++++l+ e +f+lkq++dil+ +l+krgvd++a++ ++  ++sgk+++q+v +k+
  A0A3G4V556   2 PSFDIVSEIDTVELRNAVDNANRELATRFDFRNVEASFSQND--ESVKLSCEGDFQLKQMRDILRGNLTKRGVDVNAMESQT-AEQSGKQWHQTVLFKQ 97 
                 7**************************************855..89**********************************98.899************* PP

      DUF520 100 gidkekakkivklikdsklkvqaqiqgdevRvtgkkrDdLQeviallkeedldlplqftNfr 161
                 gi+++ akkivkl+kdsk+kvq +iqgd+vRvtgkkrDdLQ++++l+k+ +l++p+qf+Nfr
  A0A3G4V556  98 GIETNVAKKIVKLVKDSKIKVQVAIQGDKVRVTGKKRDDLQATMQLVKTGELGQPFQFNNFR 159
                 *************************************************************9 PP



Or compare A0A3G4V556 to CDD or PaperBLAST