A0JN30 has 182 amino acids
Query: DUF3456 [M=150]
Accession: PF11938.12
Description: TLR4 regulator and MIR-interacting MSAP
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.5e-51 158.3 0.2 1.1e-50 158.1 0.2 1.0 1 A0JN30
Domain annotation for each sequence (and alignments):
>> A0JN30
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 158.1 0.2 1.1e-50 1.1e-50 1 150 [] 27 171 .. 27 171 .. 0.93
Alignments for each domain:
== domain 1 score: 158.1 bits; conditional E-value: 1.1e-50
DUF3456 1 kCeaCkaladeleealskvkpkkevdvggfrldkkgkrkkkkikyakSelrltelleevCekmldYnlhkekktskrtlkrlasrkgvkvelgikyelwded 102
+C+aC+al+dele+++++v+pkk++++g+fr++++g+++ +++ya+Se++ltellee+C++m++Y ++ +++t+++ ++r+ r+g + + + + ++ d
A0JN30 27 HCGACRALVDELEWEIARVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGGSS--ELDLQGIRID 126
6************************************************************************************88555..5566666666 PP
DUF3456 103 saevnkslkkaCerlvEeyEdeieelykkeqeeedlekkLCserskeC 150
++++ +lk+aCe++vEeyEde++e++++ ++ +++++kLCs+r+++C
A0JN30 127 -SDISGTLKFACESIVEEYEDELIEFFSR-EA-DNVKDKLCSKRTDLC 171
.778899**********************.33.59***********99 PP
Or compare A0JN30 to CDD or PaperBLAST