A6T742 has 701 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.8e-71 224.6 0.0 9.2e-67 210.7 0.0 2.3 2 A6T742
Domain annotation for each sequence (and alignments):
>> A6T742
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 210.7 0.0 9.2e-67 9.2e-67 1 196 [. 162 375 .. 162 376 .. 0.97
2 ! 11.7 0.0 8.2e-06 8.2e-06 79 169 .. 563 656 .. 532 662 .. 0.84
Alignments for each domain:
== domain 1 score: 210.7 bits; conditional E-value: 9.2e-67
UPF0020 1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeear.....aelklygsDl 84
RgyR+ +g ap+ke+LAaa+v+++gw +g+pllDPmCGsGt+lIEaa+l++++apgl+r ++++ +kaea+++ar +e ++ygsD
A6T742 162 RGYRDGTGMAPIKENLAAAIVMRSGWVPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGHWGFggwaqhddaiwkeVKAEAQTRARqglaaYESRFYGSDV 263
9**************************************************************************999999999999888555555****** PP
UPF0020 85 drrvvqgareNaekagvgdliefsqadaakLr..lkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekaleeralrkv 184
d+rv+++ar+Na++ag+g+li+f ++d+a+L+ l++g ++++++npPYGerl+s++al +L+s ++r +k+++ g +++++++++ +l ++l+ ra +++
A6T742 264 DARVIERARRNARRAGIGELIDFDVKDVAQLNnpLPKGPYGTVISNPPYGERLESEPALIALHSLLGRIMKSQFGG--WNLSVFSASPELLSCLQLRADKQF 363
********************************999***************************************99..************************ PP
UPF0020 185 keknvklglllk 196
k+kn++l++++k
A6T742 364 KAKNGPLDCVQK 375
*********997 PP
== domain 2 score: 11.7 bits; conditional E-value: 8.2e-06
UPF0020 79 lygsDldrrvvqgareNaekagvgdlie.fsqadaak.LrlkegevdvivtnpP...YGerlgskkalekLYseflrelkrvlrgggrlvlltaen 169
+D+ r +++ a++N++ g++++ + + qad+ Lr++++++d+i +pP +r++++ ++++ + +++ lkr lr+gg +++++n
A6T742 563 TTTVDMSRTYLEWAERNLRLNGLTGRAHrLMQADVLGwLRESTEQFDLIFIDPPtfsNSKRMEDAFDVQRDHIRLMTDLKRLLRKGG--TIMFSNN 656
5679******************9988653789999864779999**********64446899999999*****************44..4444444 PP
Or compare A6T742 to CDD or PaperBLAST