PaperBLAST – Find papers about a protein or its homologs

 

Align A8BII4 to PF07933 (DUF1681)

A8BII4 has 178 amino acids

Query:       DUF1681  [M=158]
Accession:   PF07933.18
Description: Protein of unknown function (DUF1681)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    5.4e-46  142.3   0.0    6.2e-46  142.1   0.0    1.0  1  A8BII4    


Domain annotation for each sequence (and alignments):
>> A8BII4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.1   0.0   6.2e-46   6.2e-46       1     158 []       3     157 ..       3     157 .. 0.94

  Alignments for each domain:
  == domain 1  score: 142.1 bits;  conditional E-value: 6.2e-46
  DUF1681   1 iervllvakevhvYkippltsskgyraadWtakepiwtgrlrvvekgkkvdikLedkktgelfaaapve..tkeaavekvlDSsRyFvlrvedek.grkafl 99 
              +e+vl ++++v+ Yk+pp+ + +++++adW  +  i++g+l +++kg++++++L  ++tg+  a++p+e   +  +vek++DSsRyFv+ v+d++  + af+
   A8BII4   3 FEQVLATVTQVVAYKLPPTLNLSSFKCADWPGEWVIFQGNLSIISKGEACSVSLVAPDTGAEAARFPIEykGTVPVVEKASDSSRYFVIVVKDPTgAKMAFI 104
              699*****************************************************************97655677*******************7788*** PP

  DUF1681 100 GigFeeRsdafdfnvalqdaekrlkkekeaeekekeeeekkekkdysLkeGetikinlg 158
              GigF+eR+ af f++al d+ k l+++++     ++   ++   d+sLk+Ge+iki lg
   A8BII4 105 GIGFQERDGAFAFQAALADHGKLLDRKAHPP---AQIVVNQ---DFSLKSGEKIKIGLG 157
              ***************************9998...4777777...************885 PP



Or compare A8BII4 to CDD or PaperBLAST