PaperBLAST – Find papers about a protein or its homologs

 

Align A8FGB2 to PF01817 (CM_2)

A8FGB2 has 358 amino acids

Query:       CM_2  [M=79]
Accession:   PF01817.25
Description: Chorismate mutase type II
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-22   65.6   0.6    5.9e-22   64.2   0.6    1.8  1  A8FGB2    


Domain annotation for each sequence (and alignments):
>> A8FGB2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   64.2   0.6   5.9e-22   5.9e-22       1      79 []      10      87 ..      10      87 .. 0.95

  Alignments for each domain:
  == domain 1  score: 64.2 bits;  conditional E-value: 5.9e-22
    CM_2  1 RkeIdeiDrelleLlaeRmelakeiaeyKkenglpvldpeReeevlerlre...gaeelgldpeavekifreiisesralQk 79
            R++ de++ ++l+L++eR +++kei+++K+++g++ +dp Re+ +l+++ e   g+    ++++++++if+ei+++ ++lQ+
  A8FGB2 10 RQQADELNLQILKLINERGNIVKEIGKAKEAQGVNRYDPVRERTMLNQILEendGP----FENSTIQHIFKEIFKAGLELQE 87
            9999***********************************************65555....*******************996 PP



Or compare A8FGB2 to CDD or PaperBLAST