PaperBLAST – Find papers about a protein or its homologs

 

Align BRENDA::D2SMM5 to PF06722 (EryCIII-like_C)

BRENDA::D2SMM5 has 529 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-19   55.9   0.0    4.3e-19   55.0   0.0    1.4  1  BRENDA::D2SMM5  


Domain annotation for each sequence (and alignments):
>> BRENDA::D2SMM5  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.0   0.0   4.3e-19   4.3e-19      30     133 ..     348     453 ..     311     459 .. 0.91

  Alignments for each domain:
  == domain 1  score: 55.0 bits;  conditional E-value: 4.3e-19
  EryCIII-like_C  30 pdnvRlvdfvPlgvll..ptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsdsiakavaevvedpayraaa 122
                       n Rl  ++P ++ll  p + a++ hgGa+ +  a+ +GvP v +p +ad++ +  ++++ Ga++ l  d++ s  + +a++ v++dp y+++ 
  BRENDA::D2SMM5 348 GLNTRLYKWMPQNDLLghPKTRAFITHGGASGIYEAIYHGVPMVGIPLFADQPDNIAHMKAKGAAVRLDFDTMSSTDLVNALKTVINDPLYKENV 442
                     4599***********9667899************************************************************************* PP

  EryCIII-like_C 123 aklaeeiaaeP 133
                      kl +   ++P
  BRENDA::D2SMM5 443 MKLSRIQHDQP 453
                     **998777777 PP



Or compare BRENDA::D2SMM5 to CDD or PaperBLAST