PaperBLAST – Find papers about a protein or its homologs

 

Align BRENDA::O67636 to PF02153 (PDH_N)

BRENDA::O67636 has 311 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.9e-60  189.0   0.0    2.8e-60  188.5   0.0    1.2  1  BRENDA::O67636  


Domain annotation for each sequence (and alignments):
>> BRENDA::O67636  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.5   0.0   2.8e-60   2.8e-60       1     153 [.      45     198 ..      45     199 .. 0.99

  Alignments for each domain:
  == domain 1  score: 188.5 bits;  conditional E-value: 2.8e-60
           PDH_N   1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkea..divllavPvevilevlkelaphlkedalitDvgsvKekvvkelekll 93 
                     +a++lrr+gfk +++gydi++e++++a++lg++de t++i++v+++  d+v+l++Pv++++e++k+l+++l+eda++tD+gsvK k+v++le++l
  BRENDA::O67636  45 FAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFspDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 139
                     79********************************************9************************************************ PP

           PDH_N  94 kgksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
                       k+fvgghP+aGteksGv+++ ++l+e+++viLtPt+ktdk++l+lvk+++e+vg++v+
  BRENDA::O67636 140 G-KRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVE 198
                     *.*******************************************************986 PP



Or compare BRENDA::O67636 to CDD or PaperBLAST