PaperBLAST – Find papers about a protein or its homologs

 

Align C0NQQ6 to PF03690 (MYG1_exonuc)

C0NQQ6 has 371 amino acids

Query:       MYG1_exonuc  [M=318]
Accession:   PF03690.18
Description: Uncharacterised protein family (UPF0160)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
     1e-122  395.7   0.0   1.4e-122  395.3   0.0    1.2  1  C0NQQ6    


Domain annotation for each sequence (and alignments):
>> C0NQQ6  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  395.3   0.0  1.4e-122  1.4e-122       1     318 []      16     370 ..      16     370 .. 0.97

  Alignments for each domain:
  == domain 1  score: 395.3 bits;  conditional E-value: 1.4e-122
  MYG1_exonuc   1 kigTHsgsFhaDevlAvalLkllpeykdaeivRtrdpevlekcdivvDVggvydpekkryDHHqreFketfsekkktklSSaGLvykhfgkeiikkll 98 
                  +igTH+g+FhaDe+lAv+lL+llp+y+++ +vRtrdp+ l++c++vvDVgg+ydp+++ryDHHqr+F+ tf+++ +tklSSaGL+y hfgk+ii++++
       C0NQQ6  16 TIGTHNGHFHADEALAVYLLRLLPTYTSSPLVRTRDPSLLATCHTVVDVGGEYDPSRNRYDHHQRTFTATFPQH-STKLSSAGLIYLHFGKAIIAQHT 112
                  69**********************************************************************77.7********************** PP

  MYG1_exonuc  99 klkvdeeevellyekvyeefieaiDaiDnGisvyde......eiepkykikt.tlssrvgrlnpswneeeseedederFekAselvgeeflekvkyya 189
                  +l+ d+++v +lyek+y++fiea+Da+DnGisvyd+      +++++++++  +l ++vg+ln+   +++  +ded+ Fe+As+++g+ fl+k++ ++
       C0NQQ6 113 SLPPDHPDVATLYEKLYSDFIEALDANDNGISVYDNaalnaaGVRKRFRDSGiSLGALVGDLNHPDPTATGPQDEDALFENASTFIGDAFLRKLRVAS 210
                  *****************************************99*********************99999***************************** PP

  MYG1_exonuc 190 kswlpareivkealekrkevdesgrilvleqs.vpwkehllelekelkie...................kevlyvlyed...eskkwrvqavpvsees 264
                   swlpar++v ea+++r+++++sgrilvl ++ +pwkehl+ le+e+ ++                   ++v+yvly++    ++kwrvq+vpv+++s
       C0NQQ6 211 ASWLPARATVSEAYKARFDTHASGRILVLPKAgIPWKEHLFVLEEEEAAAaaagaeaeagkiggahvdrRQVYYVLYPEstaPEAKWRVQCVPVTDTS 308
                  *****************************8877**********999886667899999**********99*******98788899************* PP

  MYG1_exonuc 265 fesrkpLpeewrGlrdeeLsevsgie........gavFvHasGFiggnktkegalkmakkal 318
                  fesr pLpe+w G+rde+L+++   e        gavFvHa+GFigg++t+ega++ma ++l
       C0NQQ6 309 FESRRPLPEAWCGIRDEDLDKLLASEetsvvvppGAVFVHATGFIGGHATREGAFAMAVRSL 370
                  *********************9888888888999************************9987 PP



Or compare C0NQQ6 to CDD or PaperBLAST