PaperBLAST – Find papers about a protein or its homologs

 

Align CAZy::AAA18021.1 to PF06722 (EryCIII-like_C)

CAZy::AAA18021.1 has 530 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence         Description
    ------- ------ -----    ------- ------ -----   ---- --  --------         -----------
    1.5e-20   59.7   0.0    4.2e-20   58.3   0.0    1.7  2  CAZy::AAA18021.1  


Domain annotation for each sequence (and alignments):
>> CAZy::AAA18021.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -4.0   0.0      0.69      0.69     102     120 ..     121     139 ..     119     148 .. 0.76
   2 !   58.3   0.0   4.2e-20   4.2e-20       8     133 ..     330     454 ..     323     459 .. 0.87

  Alignments for each domain:
  == domain 1  score: -4.0 bits;  conditional E-value: 0.69
    EryCIII-like_C 102 sdsiakavaevvedpayra 120
                       sds ++a++evv ++++  
  CAZy::AAA18021.1 121 SDSCENACKEVVFNKTLMT 139
                       6778899999999888755 PP

  == domain 2  score: 58.3 bits;  conditional E-value: 4.2e-20
    EryCIII-like_C   8 aelDaEivvaldedarpdlrelpdnvRlvdfvPlgvll..ptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskd 98 
                       a+l + ++  +d ++ +    l +n R+ d++P ++ll  p ++a+v hgGa  +  a+++G+P v lp + +++ +  ++++ Ga+i l+ +
  CAZy::AAA18021.1 330 AQLPQKVIWRFDGQKPE---TLGPNTRIYDWIPQNDLLghPKTKAFVTHGGANGIYEAIHHGIPMVGLPLFGEQPDNIAHMTAKGAAIRLNWK 419
                       55666666666655544...4568*************9667899************************************************* PP

    EryCIII-like_C  99 eltsdsiakavaevvedpayraaaaklaeeiaaeP 133
                       ++ s+ + +a++ v++dp+y+++   l +   ++P
  CAZy::AAA18021.1 420 TMSSEDLLNALKTVINDPSYKENVMTLSSIHHDQP 454
                       ***********************999887666666 PP



Or compare CAZy::AAA18021.1 to CDD or PaperBLAST